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GSD_001A1GE.1

Pakistan/GSD_001A1GE.1/2025-10-09
U. Fatima

UVAS, human nutrition and dietetics

Submission details

Submission ID
PX453772.1
Submitting group
Date submitted
2026-03-16 09:54:37 UTC
Date released
2026-03-16 10:23:23 UTC

Clade & Lineage

Clade
1V_A

Sample details

Collection country
Pakistan
Collection subdivision level 1
punjab,lahore
Collection date
2025-10-09
Isolate name
DENV2_PAKISTAN_lahore_2025

Host

Host

INSDC

INSDC accession
NCBI release date
2025-10-14
NCBI update date
2025-10-14

Alignment and QC

Length
666 (6.2%)
Total SNPs
41

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • C8285T
  • G8287A
  • A8290G
  • T8293C
  • A8371G
  • G8383A
  • C8434T
  • A8437G
  • G8458A
  • G8506A
  • C8527A
  • C8533G
  • T8539A
  • C8549T
  • A8554C
  • C8572T
  • C8596T
  • C8605T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

NS5

  • NS5:K364R
  • NS5:R378K
Deletions
N/A
Insertions
N/A