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GenSpectrum
Organisms
Influenza B/Victoria
GenSpectrum
Organisms
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
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Influenza B/Victoria
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Browse data
GSD_002CMYQ.1
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USA/GSD_002CMYQ.1/2026-01-29
A. Rothstein,
G. Muir,
A. Sum,
A. Simas,
B. Lu,
B. Girinathan,
H. Mammadova,
P. Leeson,
A. Plocik &
D. Gratalo
Ginkgo Biosecurity
Submission details
Submission ID
PZ048879.1.seg4/PZ048881.1.seg6/PZ048880.1.seg7/PZ048882.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-16 09:57:14 UTC
Date released
2026-03-16 10:41:01 UTC
INSDC
Bioproject accession
PRJNA989177
INSDC accession seg4
PZ048879.1
INSDC accession seg6
PZ048881.1
INSDC accession seg7
PZ048880.1
INSDC accession seg8
PZ048882.1
NCBI release date
2026-02-24
Clade
Clade HA
V1A.3a.2
Clade NA
B.8
Sample details
Collection country
USA
Collection subdivision level 1
Washington
Collection date
2026-01-29
Isolate name
B/Washington/GKISBBBH52765/2026
Host
Host
Homo sapiens
INSDC seg4
Lineage seg4
vic
Alignment and QC
Length seg4
1847 (98.5%)
Total deleted nucs seg4
9
Total SNPs seg4
55
Length seg6
1528 (100%)
Total inserted nucs seg6
127
Total SNPs seg6
35
Length seg7
1160 (100%)
Total inserted nucs seg7
13
Total SNPs seg7
17
Length seg8
1083 (99.6%)
Total inserted nucs seg8
21
Total SNPs seg8
22
Nucleotide mutations
Mutations called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
seg4
C
111
T
T
159
C
C
252
A
C
270
T
G
297
A
G
312
T
A
318
G
C
375
T
C
378
T
A
427
G
C
441
T
T
444
C
G
457
A
G
460
A
A
463
G
A
484
G
C
509
T
T
510
C
Show more
seg6
T
9
C
C
125
A
T
134
C
G
194
A
T
212
C
C
309
T
A
358
G
C
394
T
C
399
T
A
504
G
C
519
T
C
534
T
A
660
C
T
714
A
G
742
A
C
849
T
T
879
C
T
885
G
Show more
seg7
C
33
T
C
46
T
A
83
G
T
125
A
C
146
T
G
316
A
A
419
G
G
447
A
G
482
A
G
500
T
G
521
A
G
536
A
A
566
G
C
656
T
A
919
G
A
967
G
T
1086
C
seg8
G
26
A
T
103
C
A
118
G
T
163
C
G
190
A
A
267
G
T
341
C
A
352
C
A
374
G
T
391
C
C
419
T
G
422
A
T
577
C
C
604
T
A
610
T
C
632
T
G
661
A
T
775
C
Show more
Deletions
seg4
562-570
Insertions
seg6
ins_0:ATCTTCTCAAAACTGAAGCAAATAGGCCAAAAATGAACA, ins_1401:TGGGGGAGTGGTTAAGTCTGTTCTAAACCCTTTGTTCCTATTTTATTTGAACAATTATCCTTACTAAACTTAATTGTTTCTGAAAAAT
seg7
ins_0:GCACTTTCTTA, ins_1147:AA
seg8
ins_1066:TAAAAATCCTCTTGTTACTAC
Amino acid mutations
Mutations called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
HA1
HA1:
I
117
V
HA1:
A
127
T
HA1:
E
128
K
HA1:
N
129
D
HA1:
K
136
E
HA1:
P
144
L
HA1:
N
150
K
HA1:
A
154
E
HA1:
G
184
E
HA1:
A
199
T
HA1:
K
203
R
HA1:
S
208
P
HA1:
S
255
P
HA1:
I
267
V
HA1:
R
279
K
M1
M1:
T
15
I
M1:
R
105
K
M1:
A
149
T
NA
NA:
P
42
Q
NA:
I
45
T
NA:
R
65
H
NA:
V
71
A
NA:
I
120
V
NA:
K
220
N
NA:
V
248
I
NA:
S
295
R
NA:
N
340
D
NA:
K
343
E
NA:
E
358
K
NA:
I
361
T
NA:
D
384
G
NA:
A
395
V
NA:
S
397
K
NA:
V
401
I
NEP
NEP:
L
30
S
NEP:
S
93
P
NS1
NS1:
K
79
R
NS1:
Y
104
H
NS1:
K
107
N
NS1:
T
115
A
NS1:
L
130
F
NS1:
D
131
N
NS1:
H
201
Y
Deletions
HA1
HA1:162-164
Insertions
N/A
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