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GSD_002DCA8.1

USA/GSD_002DCA8.1/2026-02-12
W. E. Gruner, V. S. Hogan, D. M. Muehleman, A. C. Fries, J. F. Hanson, D. L. Kramer, L. S. Demarcus, P. M. Wasik, E. A. Macias, J. M. Garcia, C. A. Smetana & T. R. Hartless

United States Air Force School of Aerospace Medicine Public Health Submission Group, 711th Human Performance Wing

Submission details

Submission ID
PZ137027.1.seg4/PZ137041.1.seg8
Submitting group
Date submitted
2026-03-16 09:57:14 UTC
Date released
2026-03-16 10:42:01 UTC

Clade

Clade HA
V1A.3a.2

Sample details

Collection country
USA
Collection subdivision level 1
Alaska
Collection date
2026-02-12
Isolate name
B/Alaska/USAFSAM-17098/2026

Host

Host

INSDC

INSDC accession seg4
INSDC accession seg8
NCBI release date
2026-03-11

INSDC seg4

Lineage seg4
vic

Alignment and QC

Length seg4
1749 (93.3%)
Total deleted nucs seg4
9
Total SNPs seg4
49
Length seg8
1027 (96.3%)
Total SNPs seg8
22

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions

seg4

  • T159C
  • C252A
  • C270T
  • G297A
  • G312T
  • A318G
  • C375T
  • C378T
  • A427G
  • C441T
  • T444C
  • C453T
  • G457A
  • G460A
  • A463G
  • A484G
  • C509T
  • T510C

seg8

  • A118G
  • T163C
  • G190A
  • T341C
  • A352C
  • T391C
  • T400C
  • T401C
  • C419T
  • A426G
  • C604T
  • A610T
  • C632T
  • G652A
  • G661A
  • G685A
  • T775C
  • C882T
Deletions

seg4

562-570
Insertions
N/A

Amino acid mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions

HA1

  • HA1:I117V
  • HA1:A127T
  • HA1:E128K
  • HA1:N129D
  • HA1:K136E
  • HA1:P144L
  • HA1:N150K
  • HA1:A154E
  • HA1:M156V
  • HA1:G184E
  • HA1:A199T
  • HA1:K203R
  • HA1:R279K

HA2

  • HA2:D150N

NEP

  • NEP:L30S
  • NEP:S93P
  • NEP:V115I

NS1

  • NS1:Y104H
  • NS1:K107N
  • NS1:S124P
  • NS1:L130F
  • NS1:D132G
  • NS1:H201Y
Deletions

HA1

HA1:162-164
Insertions
N/A