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GSD_00FTVPQ.1

India/GSD_00FTVPQ.1/2024-11-13
Verma. Chandan Kumar, Raj. Anchal, Brijwal. Megha, Mani. Shailendra, Bhattacharya. Jayanta & Bhattacharyya. Sankar

1-Center of Virus Research, Therapeutics and Vaccines, BRIC-Translational Health Science and Technology Institute, Faridabad?121001 ,Delhi-NCR, India,2-Department of Microbiology, All India Institute of Medical Sciences , Ansari Nagar, New Delhi - 110029, Delhi

Submission details

Submission ID
OZ432341.1
Submitting group
Date submitted
2026-03-18 04:08:24 UTC
Date released
2026-03-18 04:09:20 UTC

INSDC

Bioproject accession
Biosample accession
INSDC accession
NCBI release date
2026-03-16
NCBI update date
2026-03-17

Clade & Lineage

Clade
3III_B.3

Sample details

Collection country
India
Collection subdivision level 1
New Delhi
Collection date
2024-11-13
Isolate name
Dengue Virus Clinical isolate

Alignment and QC

Length
10707 (98.9%)
Total SNPs
441
Total unknown nucs
120

Nucleotide mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

  • G65A
  • C203T
  • C214T
  • T235C
  • T250C
  • C256T
  • A265G
  • C289T
  • T295C
  • G322T
  • C334T
  • C358T
  • A361C
  • C383A
  • C469G
  • T496G
  • T556C
  • G565A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

2K

  • 2K:L17M
  • 2K:T20I

C

  • C:Q97K

E

  • E:V158T
  • E:A171V
  • E:I172V
  • E:A219T
  • E:V322I
  • E:I380T
  • E:E404A

NS1

  • NS1:I71V
  • NS1:L94I
  • NS1:K170R
  • NS1:L178M
  • NS1:T233S
  • NS1:S290N

NS2A

  • NS2A:L23M
  • NS2A:F38L
  • NS2A:V127I
  • NS2A:V150I

NS2B

  • NS2B:P57A
  • NS2B:T60S

NS3

  • NS3:E43D
  • NS3:T112M
  • NS3:D392E
  • NS3:T476M

NS4A

  • NS4A:D36H
  • NS4A:V100I

NS4B

  • NS4B:I115V
  • NS4B:M151I
  • NS4B:S157P
  • NS4B:F160Y

NS5

  • NS5:R47K
  • NS5:V72I
  • NS5:T188A
  • NS5:V234I
  • NS5:E429D
  • NS5:I553T
  • NS5:Q562L
  • NS5:L603V
  • NS5:T629S
  • NS5:L639P
  • NS5:E820D
  • NS5:V830I
Deletions
N/A
Insertions
N/A