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GSD_00FTVZ4.1

India/GSD_00FTVZ4.1/2024-11-03
Verma. Chandan Kumar, Raj. Anchal, Brijwal. Megha, Mani. Shailendra, Bhattacharya. Jayanta & Bhattacharyya. Sankar

1-Center of Virus Research, Therapeutics and Vaccines, BRIC-Translational Health Science and Technology Institute, Faridabad?121001 ,Delhi-NCR, India,2-Department of Microbiology, All India Institute of Medical Sciences , Ansari Nagar, New Delhi - 110029, Delhi

Submission details

Submission ID
OZ432338.1
Submitting group
Date submitted
2026-03-18 04:18:57 UTC
Date released
2026-03-18 04:19:50 UTC

INSDC

Bioproject accession
Biosample accession
INSDC accession
NCBI release date
2026-03-16
NCBI update date
2026-03-17

Clade & Lineage

Clade
1III_A

Sample details

Collection country
India
Collection subdivision level 1
New Delhi
Collection date
2024-11-03
Isolate name
Dengue Virus Clinical isolate

Alignment and QC

Length
10736 (81.7%)
Frame shifts
prM:37-166(nt:545-934)
Total frame shifts
1
Total inserted nucs
1
Total SNPs
582
Total unknown nucs
1967

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • A112G
  • T171G
  • T208C
  • T230A
  • T244C
  • T274C
  • G302A
  • G349A
  • A355G
  • A363G
  • T368C
  • T397C
  • C431T
  • T442C
  • C443T
  • C451A
  • G466A
  • G480C
Deletions
N/A
Insertions

ins_544:A

Amino acid mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

C

  • C:V26G
  • C:L46M
  • C:G70S
  • C:N90S

E

  • E:D37N
  • E:T88A
  • E:I114L
  • E:T161I
  • E:K203E
  • E:I293T
  • E:M297V
  • E:S305P
  • E:F337I
  • E:S339T
  • E:A369T
  • E:V380I
  • E:I436V
  • E:I439V

NS1

  • NS1:S94N
  • NS1:A98T
  • NS1:V128T
  • NS1:N139D
  • NS1:N146D
  • NS1:I162L
  • NS1:V178M

NS2A

  • NS2A:R82K
  • NS2A:V106I
  • NS2A:A147T
  • NS2A:V155I
  • NS2A:F159L
  • NS2A:H162D
  • NS2A:I171V
  • NS2A:F178S
  • NS2A:L199F

NS3

  • NS3:R185K
  • NS3:R215G
  • NS3:V221I
  • NS3:K255R
  • NS3:V384I
  • NS3:V452A

NS4B

  • NS4B:K212R

NS5

  • NS5:L123I
  • NS5:A245V
  • NS5:K248R
  • NS5:V270I
  • NS5:K364R
  • NS5:A365P
  • NS5:R378K
  • NS5:N585S
  • NS5:A616V
  • NS5:T635N
  • NS5:P636S
  • NS5:V642A
  • NS5:K647E
  • NS5:T651V
  • NS5:F881Y

prM

  • prM:S15T
Deletions
N/A
Insertions
N/A