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GSD_00FTW9J.1
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USA/GSD_00FTW9J.1/2026-03-07
A. Hassan &
B. Cherrelle
New Jersey Department of Health-Influenza Surveillance, Public Health & Environmental Laboratories (PHEL), Bioinformatics Program
Submission details
Submission ID
PZ166102.1.seg4/PZ166103.1.seg6/PZ166104.1.seg7/PZ166105.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-19 04:53:17 UTC
Date released
2026-03-19 04:53:53 UTC
Clade
Clade HA
K
Clade NA
None
Sample details
Collection country
USA
Collection subdivision level 1
New Jersey
Collection date
2026-03-07
Isolate name
A/New Jersey/V26002464/2026
Host
Host
Homo sapiens
INSDC
INSDC accession seg4
PZ166102.1
INSDC accession seg6
PZ166103.1
INSDC accession seg7
PZ166104.1
INSDC accession seg8
PZ166105.1
NCBI release date
2026-03-18
INSDC seg4
Subtype seg4
H3
INSDC seg6
Subtype seg6
N2
Alignment and QC
Length seg4
1701 (97.9%)
Total SNPs seg4
122
Length seg6
1410 (98%)
Total SNPs seg6
18
Length seg7
982 (95.6%)
Total SNPs seg7
28
Length seg8
838 (94.2%)
Total SNPs seg8
32
Nucleotide mutations
Mutations called relative to the
NC_007373.1
,
NC_007372.1
,
NC_007371.1
,
CY163680.1
,
NC_007369.1
,
CY114383.1
,
NC_007367.1
&
NC_007370.1
references
Substitutions
seg4
A
24
G
T
42
A
G
56
T
A
71
C
C
72
A
T
74
A
C
77
T
C
89
T
G
155
A
A
163
G
C
189
T
G
199
A
C
203
A
C
208
T
G
213
A
G
214
A
G
222
A
A
250
G
Show more
seg6
G
34
A
C
40
T
A
64
G
T
100
C
C
349
A
G
456
A
G
517
A
T
715
C
C
797
A
T
1015
C
A
1044
G
A
1079
G
A
1160
G
G
1206
A
G
1342
A
G
1390
A
A
1410
G
T
1413
C
seg7
A
37
T
C
188
T
G
205
A
G
214
T
A
241
G
T
292
C
A
295
G
T
298
C
A
466
G
A
481
G
C
493
T
A
517
G
G
523
A
A
529
G
A
637
G
A
658
G
G
680
A
T
703
C
Show more
seg8
C
53
T
G
83
A
G
102
A
A
104
C
C
116
T
C
123
A
T
125
C
G
192
T
T
205
C
T
218
C
A
238
G
T
271
C
C
275
G
G
353
A
G
398
A
G
416
A
G
430
A
A
442
G
Show more
Deletions
N/A
Insertions
N/A
Amino acid mutations
Mutations called relative to the
NC_007373.1
,
NC_007372.1
,
NC_007371.1
,
CY163680.1
,
NC_007369.1
,
CY114383.1
,
NC_007367.1
&
NC_007370.1
references
Substitutions
HA1
HA1:
K
2
N
HA1:
L
3
I
HA1:
Q
33
R
HA1:
S
45
N
HA1:
T
48
I
HA1:
G
50
K
HA1:
D
53
N
HA1:
E
62
G
HA1:
K
83
E
HA1:
K
92
R
HA1:
Y
94
N
HA1:
N
96
S
HA1:
N
121
K
HA1:
T
131
K
HA1:
T
135
K
HA1:
S
138
A
HA1:
R
142
G
HA1:
N
145
S
Show more
HA2
HA2:
V
18
M
HA2:
I
32
R
HA2:
N
46
D
HA2:
I
77
V
HA2:
R
121
K
HA2:
G
155
E
HA2:
D
160
N
HA2:
I
193
M
HA2:
V
200
I
M1
M1:
V
219
I
M2
M2:
P
25
L
M2:
S
31
N
M2:
L
54
F
M2:
N
82
S
M2:
D
88
A
NA
NA:
R
150
H
NA:
H
264
N
NA:
D
346
G
NA:
N
358
D
NA:
N
385
D
NA:
R
400
K
NA:
H
468
R
NA:
I
469
T
NEP
NEP:
I
113
M
NS1
NS1:
E
26
N
NS1:
L
33
I
NS1:
A
56
S
NS1:
V
60
A
NS1:
E
71
G
NS1:
V
82
A
NS1:
M
124
I
NS1:
S
135
N
NS1:
D
139
G
NS1:
I
171
V
NS1:
L
185
F
NS1:
N
209
D
NS1:
K
221
E
NS1:
K
229
E
SigPep
SigPep:
T
3
A
SigPep:
Y
9
N
Deletions
N/A
Insertions
N/A
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