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GSD_00FZ6L7.1

USA/GSD_00FZ6L7.1/2026-04-13
W. E. Gruner, V. S. Hogan, D. M. Muehleman, A. C. Fries, J. F. Hanson, D. L. Kramer, L. S. Demarcus, P. M. Wasik, E. A. Macias, J. M. Garcia, C. A. Smetana & T. R. Hartless

United States Air Force School of Aerospace Medicine Public Health Submission Group, 711th Human Performance Wing

Submission details

Submission ID
PZ343991.1.seg2/PZ343984.1.seg3/PZ343968.1.seg4/PZ343970.1.seg7/PZ343979.1.seg8
Submitting group
Date submitted
2026-05-02 04:32:04 UTC
Date released
2026-05-02 04:32:50 UTC

Clade

Clade HA
V1A.3a.2

Sample details

Collection country
USA
Collection subdivision level 1
North Dakota
Collection date
2026-04-13
Isolate name
B/North Dakota/USAFSAM-17433/2026

Host

Host

INSDC

INSDC accession seg2
INSDC accession seg3
INSDC accession seg4
INSDC accession seg7
INSDC accession seg8
NCBI release date
2026-04-29

INSDC seg4

lineage_seg4
vic

Alignment and QC

Length seg2
2313 (98.1%)
Total SNPs seg2
60
Length seg3
2181 (97.1%)
Total SNPs seg3
52
Length seg4
1749 (93.3%)
Total deleted nucs seg4
9
Total SNPs seg4
47
Length seg7
1076 (93.8%)
Total SNPs seg7
22
Length seg8
1027 (96.3%)
Total SNPs seg8
23

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions

seg2

  • G12A
  • A30G
  • A54G
  • G81A
  • A95G
  • T168C
  • T171C
  • T240C
  • A294C
  • T300A
  • T330C
  • C342T
  • C393T
  • A405G
  • G441A
  • G447A
  • G510A
  • C513T

seg3

  • T111C
  • C117T
  • C120T
  • T147C
  • A186C
  • T339C
  • G414A
  • T423C
  • A618G
  • T654C
  • A771G
  • A786G
  • C813T
  • A834G
  • G867A
  • A870C
  • C897T
  • A935G

seg4

  • T159C
  • C252A
  • C270T
  • G297A
  • G312T
  • A318G
  • C375T
  • C378T
  • A427G
  • C441T
  • T444C
  • C453T
  • G457A
  • G460A
  • A463G
  • A484G
  • C509T
  • T510C

seg7

  • C33T
  • C46T
  • A83G
  • T125A
  • A377G
  • A419G
  • G482A
  • G500T
  • T515C
  • G521A
  • A524G
  • G536A
  • C542T
  • A566G
  • C603T
  • C656T
  • G668A
  • A851G

seg8

  • C36A
  • G37A
  • A118G
  • T163C
  • G190A
  • A352C
  • T391C
  • G415A
  • C419T
  • C487T
  • G598A
  • C604T
  • A610T
  • A627G
  • C632T
  • G661A
  • G678A
  • G685A
Deletions

seg4

562-570
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions

BM2

  • BM2:I35V

HA1

  • HA1:I117V
  • HA1:A127T
  • HA1:E128K
  • HA1:N129D
  • HA1:K136E
  • HA1:P144L
  • HA1:N150K
  • HA1:A154E
  • HA1:G184E
  • HA1:A199T
  • HA1:K203R
  • HA1:R279K

HA2

  • HA2:D158N

M1

  • M1:T15I

NEP

  • NEP:A2E
  • NEP:L30S
  • NEP:S93P
  • NEP:D113N

NS1

  • NS1:A2E
  • NS1:K107N
  • NS1:L130F
  • NS1:N199S
  • NS1:H201Y
  • NS1:S216N

PA

  • PA:K312R
  • PA:T352A
  • PA:D529N
  • PA:S530T
  • PA:F709V
  • PA:N714S
  • PA:I723V

PB2

  • PB2:N31S
  • PB2:T293A
  • PB2:X303I
  • PB2:R322K
  • PB2:I492T
  • PB2:X582E
Deletions

HA1

HA1:162-164
Insertions
N/A