Warning: Development or Keycloak main database is enabled. Development environment only.
Bangladesh/GSD_00G4P0M.1/2025-11-27
M. A. O. Nasif, A. N. Alam, M. H. K. Jony, M. A. Bhuiyan, S. Sultana, A. Hossen, L. Karmakar & T. Shirin

Institute of Epidemiology, Disease Control and Research, Dhaka, Dhaka

Submission details

Submission ID
OZ484516.1
Date submitted
2026-06-19 04:50:55 UTC
Date released
2026-06-19 04:51:51 UTC

INSDC

bioprojectAccession
biosampleAccession
INSDC accession
NCBI release date
2026-06-17
NCBI update date
2026-06-18

Clade & Lineage

Clade
3I_A.2

Sample details

Collection country
Bangladesh
Collection subdivision level 1
Dhaka
Collection date
2025-11-27
Isolate name
IEDCR-ARBV2501063

Host


Alignment and QC

Length
10461 (86%)
Total SNPs
695
Total unknown nucs
1251

Nucleotide mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

  • G62A
  • G65A
  • G112A
  • A198G
  • C211T
  • G217A
  • A277G
  • A283G
  • G287A
  • C325T
  • A339G
  • A351G
  • C364T
  • A376T
  • C379T
  • C383A
  • A384G
  • G400A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001475.2 reference

Substitutions

2K

  • 2K:T20I
  • 2K:I21V

C

  • C:K35R
  • C:V65I
  • C:K82R
  • C:K86R
  • C:Q97R
  • C:I108M
  • C:A112T

E

  • E:I68V
  • E:V81I
  • E:P124L
  • E:Y132H
  • E:T169V
  • E:A219T
  • E:R231K
  • E:N270T
  • E:T301S
  • E:T303A
  • E:E404A
  • E:V452I
  • E:A479V

NS1

  • NS1:S145N
  • NS1:V174M
  • NS1:V188I
  • NS1:T233S
  • NS1:S339N

NS2A

  • NS2A:L23M
  • NS2A:F37L
  • NS2A:V127I
  • NS2A:T153M
  • NS2A:V175I
  • NS2A:L178F
  • NS2A:S184T
  • NS2A:K216R

NS2B

  • NS2B:P57A

NS3

  • NS3:H60Y
  • NS3:S86N
  • NS3:V100I
  • NS3:T112M
  • NS3:T115I
  • NS3:I126V
  • NS3:R255K
  • NS3:E350D
  • NS3:A452V
  • NS3:I474V
  • NS3:T476M
  • NS3:K557R
  • NS3:Q568E

NS4A

  • NS4A:D36H
  • NS4A:A68V
  • NS4A:I78V
  • NS4A:I89V
  • NS4A:E99D
  • NS4A:V100I

NS4B

  • NS4B:I115V
  • NS4B:S157P
  • NS4B:F160Y
  • NS4B:L190F

NS5

  • NS5:T50I
  • NS5:H52R
  • NS5:V72I
  • NS5:V114I
  • NS5:S153C
  • NS5:H246Y
  • NS5:K281R
  • NS5:N288S
  • NS5:M336T
  • NS5:R364K
  • NS5:A372V
  • NS5:T404A
  • NS5:K422R
  • NS5:Y503H
  • NS5:I553T
  • NS5:T585K
  • NS5:L603V
  • NS5:V619I

prM

  • prM:H55L
  • prM:T107A
  • prM:V120I
  • prM:L128F
Deletions
N/A
Insertions
N/A