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GS_0003A58.1

Display Name: Uruguay/GS_0003A58.1/2023-02-09
J. Xavier, M. Lima, E. de Castro, V. Fonseca, M. Giovanetti & L. Alcantara

Submission details

Submission ID
OR501016.1
Submitting group
Date submitted
2025-06-30 20:17:37 UTC
Date released
2025-06-30 20:26:05 UTC

Authors

Author affiliations
Pan American Health Organization (PAHO), PHE-Brazil

Clade & Lineage

Clade
4II_B.1.1

Alignment states and QC metrics

Completeness
10.74%
Length
1144
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
33
Total unknown nucs
0

Sample details

Collection country
Uruguay
Collection subdivision level 1
Rocha
Collection date
2023-02-09
Isolate name
DENV4_URUGUAY_Rocha_23-34_2023-02-09

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2024-09-02
NCBI update date
2024-09-02

Nucleotide mutations

Mutations called relative to the NC_002640.1 reference

Substitutions

  • T8918C
  • T8936A
  • A8972G
  • C8990T
  • G8999A
  • C9050T
  • T9068C
  • T9113C
  • T9203C
  • T9281C
  • C9318A
  • G9320A
  • A9356G
  • T9437A
  • A9473T
  • A9508G
  • C9545T
  • G9569A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_002640.1 reference

    Substitutions

    NS5

  • NS5:K649R
    • Deletions
    None
    Insertions
    None