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GS_0003MQS.1

Display Name: India/GS_0003MQS.1/2022-11-01
A. Tripathi & P. Ghosh

Submission details

Submission ID
PQ578406.1
Submitting group
Date submitted
2025-06-30 20:17:37 UTC
Date released
2025-06-30 20:27:05 UTC

Authors

Author affiliations
Calcutta School of Tropical Medicine, Biochemistry and Medical Biotechnology

Clade & Lineage

Clade
unassigned

Alignment states and QC metrics

Completeness
3.63%
Length
386
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
0
Total SNPs
13
Total unknown nucs
0

Sample details

Collection country
India
Collection date
2022-11-01
Isolate name
D2226

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2024-11-16
NCBI update date
2024-11-16

Nucleotide mutations

Mutations called relative to the NC_002640.1 reference

Substitutions

  • C10276A
  • G10287A
  • T10290C
  • T10318C
  • A10350C
  • T10352A
  • T10355C
  • T10367A
  • G10450A
  • T10452C
  • A10453G
  • A10616G
  • C10638T
    • Deletions
    10374
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_002640.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None