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GS_0003S02.1

Display Name: Thailand/GS_0003S02.1/2023-10-14
K. Suwannakarn, P. Rattanaumpawan, N. Horthongkham & A. Athipanyasilp

Submission details

Submission ID
PV628778.1
Submitting group
Date submitted
2025-06-30 20:17:37 UTC
Date released
2025-06-30 20:27:35 UTC

Authors

Author affiliations
Mahidol University, Microbiology

Clade & Lineage

Clade
4II_B

Alignment states and QC metrics

Completeness
18.06%
Length
1923
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
19
Total unknown nucs
0

Sample details

Collection country
Thailand
Collection date
2023-10-14
Isolate name
DQ04

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2025-05-17
NCBI update date
2025-05-17

Nucleotide mutations

Mutations called relative to the NC_002640.1 reference

Substitutions

  • C603T
  • C647T
  • C1004T
  • T1145C
  • G1184A
  • G1196A
  • A1403G
  • T1426C
  • C1559T
  • G1586A
  • T1592A
  • T1787C
  • T1856C
  • A1964G
  • A2042G
  • C2093T
  • A2277C
  • T2322C
  • G2348A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_002640.1 reference

    Substitutions

    E

  • E:M163T
  • E:M447L
    • Deletions
    None
    Insertions
    None