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GS_0003S10.1

Display Name: Indonesia/GS_0003S10.1/2024-10-25
D. Lokida, H. Kosasih & G. Salim

Submission details

Submission ID
PV663002.1
Submitting group
Date submitted
2025-06-30 20:17:37 UTC
Date released
2025-06-30 20:27:35 UTC

Authors

Author affiliations
RSUD Kabupaten Tangerang, Laboratorium Infeksi

Clade & Lineage

Clade
4II_A

Alignment states and QC metrics

Completeness
13.94%
Length
1485
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
90
Total unknown nucs
0

Sample details

Collection country
Indonesia
Collection subdivision level 1
Banten,Tangerang
Collection date
2024-10-25
Isolate name
DENV4/INA/2024/TNG6102125

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2025-05-26
NCBI update date
2025-05-26

Nucleotide mutations

Mutations called relative to the NC_002640.1 reference

Substitutions

  • A953G
  • A959G
  • A980G
  • A986G
  • C1004T
  • T1076C
  • A1085G
  • C1088T
  • C1112T
  • A1130G
  • G1148A
  • G1184C
  • G1196A
  • T1223C
  • C1256T
  • T1295C
  • T1296C
  • C1297T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_002640.1 reference

    Substitutions

    E

  • E:S120L
  • E:M163T
  • E:L357F
  • E:V382A
  • E:N384D
  • E:I455V
    • Deletions
    None
    Insertions
    None