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GS_000D5TG.1
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Display Name: GS_000D5TG.1/2024-04-08
Lauring,
A. S.; Papalambros,
L. K.
Submission details
Submission ID
PP896779.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:20:33 UTC
Date released
2024-12-11 16:32:37 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-12-11 16:20
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
University Of Michigan, Internal Medicine - Infectious Disease
INSDC
Bioproject accession
PRJNA1079770
INSDC accession
PP896779.1
NCBI release date
2024-06-16
NCBI update date
2024-06-16
Alignment states and QC metrics
Completeness
94.25%
Length
14941
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
1
Total SNPs
119
Total unknown nucs
596
Sample details
Collection country
USA
Collection date
2024-04-08
Isolate name
hRSV-B-G43S22J3
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Clade & Lineage
Lineage
B.D.4.1.1
Nucleotide mutations
Substitutions
C
175
T
C
212
T
G
513
T
G
579
A
G
649
A
C
767
T
G
955
A
G
1385
A
G
1732
A
T
1846
C
C
2074
T
C
2198
T
C
2484
T
C
2554
T
T
2697
C
G
2787
A
C
2868
T
T
2874
C
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Deletions
973, 4586
Insertions
ins_5610:A
Amino acid mutations
Substitutions
F
F:
S
190
N
F:
S
211
N
G
G:
A
74
V
G:
K
85
E
G:
S
100
G
G:
T
131
A
G:
I
137
T
G:
S
147
N
G:
P
214
S
G:
P
221
L
G:
P
245
S
G:
L
270
P
L
L:
K
570
R
L:
I
937
V
L:
S
1736
C
L:
S
1739
P
L:
T
1987
I
N
N:
V
97
I
NS1
NS1:
A
40
V
P
P:
K
222
R
Deletions
None
Insertions
None
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