Warning: Development or Keycloak main database is enabled. Development environment only.

GS_000DNP7.1

Display Name: GS_000DNP7.1/2024-04-10
Wei, X.; Wang, L.; Li, M.; Qi, J.; Kang, L.; Hu, G.; Gong, C.; Wang, C.; Wang, Y.; Huang, F.; Gao, G. F.

Submission details

Submission ID
PP974114.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:20:33 UTC
Date released
2024-12-11 16:33:07 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-12-11 16:20insdc_ingest_userOPEN

Authors

Author affiliations
Beijing Center for Disease Prevention and Control, Immunological Prevention

Alignment states and QC metrics

Completeness
2.33%
Length
354
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
10
Total unknown nucs
0

Sample details

Collection country
China
Collection subdivision level 1
Beijing
Collection date
2024-04-10
Isolate name
2023-00R0550

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession
PP974114.1
NCBI release date
2024-11-09
NCBI update date
2024-11-09

Clade & Lineage

Lineage
B.D.E.1

Nucleotide mutations

Substitutions

  • C5285T
  • C5307T
  • T5400C
  • C5406T
  • T5448C
  • C5451T
  • T5455C
  • T5468C
  • T5498C
  • C5530T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Substitutions

    G

  • G:P214S
  • G:P221L
  • G:I252T
  • G:T254I
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H
    • Deletions
    None
    Insertions
    None