Warning: Development or Keycloak main database is enabled. Development environment only.
X
GenSpectrum
RSV B
Influenza A/H5N1
RSV-A
RSV B
Browse
Loculus
Browse
Docs
API docs
GS_000DU8Y.1
Download
Download FASTA
Download metadata TSV
Display Name: GS_000DU8Y.1/2024-04-21
Lauring,
A. S.; Bendall,
E. E.
Submission details
Submission ID
PQ083766.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:20:33 UTC
Date released
2024-12-11 16:33:07 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-12-11 16:20
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
University of Michigan, Department of Microbiology
INSDC
Bioproject accession
PRJNA1079770
INSDC accession
PQ083766.1
NCBI release date
2024-07-31
NCBI update date
2024-07-31
Alignment states and QC metrics
Completeness
87.70%
Length
14939
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
0
Total SNPs
126
Total unknown nucs
1590
Sample details
Collection country
USA
Collection date
2024-04-21
Isolate name
hRSV-B-G43S29W7
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Clade & Lineage
Lineage
B.D.E.1
Nucleotide mutations
Substitutions
G
513
T
G
579
A
C
583
T
G
599
A
G
1028
A
G
1385
A
G
1732
A
G
1768
A
T
1846
C
C
2074
T
C
2198
T
C
2554
T
T
2589
C
C
2691
T
G
3036
C
A
3060
G
C
3067
T
C
3082
T
Show more
Deletions
973
Insertions
None
Amino acid mutations
Substitutions
F
F:
F
12
I
F:
L
22
P
F:
S
190
N
F:
S
211
N
F:
S
389
P
G
G:
S
100
G
G:
A
107
T
G:
P
109
S
G:
A
116
T
G:
T
131
A
G:
I
137
T
G:
P
214
S
G:
P
221
L
G:
P
245
S
G:
I
252
T
G:
T
254
I
G:
I
268
T
G:
A
269
V
G:
T
273
I
G:
S
275
P
G:
Y
285
H
L
L:
S
169
P
L:
K
570
R
L:
L
1031
I
L:
T
1987
I
N
N:
V
97
I
NS2
NS2:
D
6
N
Deletions
None
Insertions
None
Load sequences