Warning: Development or Keycloak main database is enabled. Development environment only.
X
GenSpectrum
RSV B
Influenza A/H5N1
RSV-A
RSV B
Browse
Loculus
Browse
Docs
API docs
GS_000DUYH.1
Download
Download FASTA
Download metadata TSV
Display Name: GS_000DUYH.1/2024-04-18
Lauring,
A. S.; Bendall,
E. E.
Submission details
Submission ID
PQ083790.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:20:33 UTC
Date released
2024-12-11 16:33:37 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-12-11 16:20
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
University of Michigan, Department of Microbiology
INSDC
Bioproject accession
PRJNA1079770
INSDC accession
PQ083790.1
NCBI release date
2024-07-31
NCBI update date
2024-07-31
Alignment states and QC metrics
Completeness
94.72%
Length
14969
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
130
Total unknown nucs
550
Sample details
Collection country
USA
Collection date
2024-04-18
Isolate name
hRSV-B-G43S32G2
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Clade & Lineage
Lineage
B.D.4.1.1
Nucleotide mutations
Substitutions
G
167
A
G
513
T
C
515
T
T
519
C
G
579
A
C
601
T
C
610
T
T
1177
C
A
1252
G
G
1385
A
C
1684
T
T
1846
C
A
1954
G
T
2113
C
C
2198
T
C
2553
T
T
2589
C
T
2601
A
Show more
Deletions
None
Insertions
None
Amino acid mutations
Substitutions
F
F:
E
66
G
F:
P
112
L
F:
S
190
N
F:
N
524
S
G
G:
R
98
G
G:
S
100
G
G:
T
122
P
G:
I
137
T
G:
Q
142
L
G:
P
245
S
G:
T
279
A
G:
L
284
P
G:
T
300
I
L
L:
I
156
V
L:
Y
177
N
L:
A
1479
V
L:
V
1533
F
L:
T
1742
M
L:
N
1916
Y
L:
A
1943
T
L:
T
1987
I
L:
A
2119
V
N
N:
V
97
I
SH
SH:
I
36
V
SH:
I
49
P
Deletions
None
Insertions
None
Load sequences