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RSV B
Influenza A/H5N1
RSV-A
RSV B
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GS_000E6BC.1
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Display Name: GS_000E6BC.1/2024-05-20
Acuna,
D.; Irazoqui,
M.; Palau,
M. J.; Vera,
A.; Vescina,
C. M.; Trevino,
N. P.; Eguiguren,
M. P.; Fernandez Gago,
G.; Alancay,
A.; Nadalich,
V.; Angeletti,
A.; Cordero,
A.; Viegas,
M.
Submission details
Submission ID
PQ600481.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:20:33 UTC
Date released
2024-12-11 16:33:37 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-12-11 16:20
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
CONICET (National Council for Scientific and Technical Research), Exacts Sciences School, National University of la Plata
Alignment states and QC metrics
Completeness
100.00%
Length
15226
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
4
Total SNPs
86
Total unknown nucs
0
Sample details
Collection country
Argentina
Collection subdivision level 1
Buenos Aires, La Plata
Collection date
2024-05-20
Isolate name
HRSV/B/Argentina/PAIS-HSML/8/2024-05-20
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PQ600481.1
NCBI release date
2024-11-25
NCBI update date
2024-11-25
Clade & Lineage
Lineage
B.D.E.1
Nucleotide mutations
Substitutions
G
458
C
G
513
T
T
670
C
C
772
A
G
1385
A
G
1768
A
A
1864
G
C
2691
T
A
2925
T
G
3036
C
C
3067
T
C
3180
T
G
3411
A
A
3579
G
A
3735
G
G
4008
A
C
4064
T
G
4129
A
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Deletions
None
Insertions
ins_15092:ATAT
Amino acid mutations
Substitutions
F
F:
F
12
I
F:
S
389
P
G
G:
A
74
V
G:
S
100
G
G:
I
252
T
G:
I
268
T
G:
S
275
P
G:
Y
285
H
L
L:
S
169
P
L:
C
195
Y
L:
K
570
R
L:
S
1239
N
L:
T
1987
I
N
N:
V
97
I
Deletions
None
Insertions
None
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