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GS_000X3W9.1
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Display Name: GS_000X3W9.1/2024-04-17
Bendall,
E. E.; Lauring,
A. S.
Submission details
Submission ID
PQ066221.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:22:19 UTC
Date released
2024-12-11 16:40:50 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-12-11 16:22
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
University of Michigan, Department of Microbiology
INSDC
Bioproject accession
PRJNA1079770
INSDC accession
PQ066221.1
NCBI release date
2024-07-30
NCBI update date
2024-07-30
Alignment states and QC metrics
Completeness
93.68%
Length
14683
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
1
Total SNPs
199
Total unknown nucs
421
Sample details
Collection country
USA
Collection date
2024-04-17
Isolate name
hRSV-A-G43S29H4
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Clade & Lineage
Lineage
A.D.3
Nucleotide mutations
Substitutions
G
555
A
A
565
G
G
587
T
C
611
A
G
972
A
C
983
A
C
1012
T
G
1034
A
G
1050
A
G
1077
A
G
1093
T
T
1359
C
T
1413
A
T
1422
C
T
1671
C
C
1788
T
C
1806
T
T
1821
C
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Deletions
4174, 4592
Insertions
ins_3154:A
Amino acid mutations
Substitutions
F
F:
T
12
I
F:
T
122
A
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
I
114
T
G:
V
131
D
G:
I
134
K
G:
N
178
G
G:
G
224
E
G:
S
243
I
G:
T
245
A
G:
G
254
R
G:
H
258
Q
G:
K
262
E
G:
I
265
L
G:
H
266
L
G:
D
284
G
G:
Y
297
H
G:
P
298
L
L
L:
N
37
D
L:
P
171
L
L:
R
256
K
L:
Y
598
H
L:
L
835
M
L:
L
1438
Q
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
K
2064
R
L:
T
2069
A
N
N:
V
352
A
NS2
NS2:
H
5
N
P
P:
L
55
P
P:
T
92
I
Deletions
None
Insertions
None
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