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GS_000X9W3.1
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Display Name: GS_000X9W3.1/2024-03-01
Guo,
L.; Wang,
Y.; Zhou,
J.; Liang,
Y.; Mao,
Y.
Submission details
Submission ID
PP833560.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:22:19 UTC
Date released
2024-12-11 16:41:20 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-12-11 16:22
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
Yunnan Institute of Pediatrics, Kunming Children's Hospital
Alignment states and QC metrics
Completeness
100.00%
Length
15227
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
3
Total SNPs
197
Total unknown nucs
0
Sample details
Collection country
China
Collection date
2024-03-01
Isolate name
hRSV/A/Kunming/1043622/2024
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PP833560.1
NCBI release date
2024-06-02
NCBI update date
2024-06-02
Clade & Lineage
Lineage
A.D.3
Nucleotide mutations
Substitutions
T
59
C
T
66
A
A
67
G
G
87
A
C
90
T
C
183
T
C
411
T
C
553
T
G
587
T
T
667
C
C
871
T
A
992
G
C
1012
T
T
1019
C
G
1034
A
G
1050
A
G
1077
A
A
1082
T
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Deletions
4592
Insertions
ins_15115:TT, ins_3154:A
Amino acid mutations
Substitutions
F
F:
T
12
I
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
T
113
I
G:
V
131
D
G:
I
134
K
G:
N
178
G
G:
G
224
E
G:
V
225
A
G:
S
243
I
G:
L
248
F
G:
H
258
Q
G:
K
262
E
G:
I
265
L
G:
H
266
L
G:
Y
273
H
G:
D
284
G
G:
L
310
P
L
L:
D
166
N
L:
P
171
L
L:
R
256
K
L:
L
323
I
L:
Y
598
H
L:
L
835
M
L:
L
1438
Q
L:
D
1644
E
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
N
1737
T
N
N:
K
7
R
N:
E
282
D
N:
V
352
A
P
P:
L
55
P
P:
T
92
M
Deletions
None
Insertions
None
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