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GS_000XBMK.1
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Display Name: GS_000XBMK.1/2024-03-16
Lauring,
A. S.; Papalambros,
L. K.
Submission details
Submission ID
PP903809.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:22:19 UTC
Date released
2024-12-11 16:41:50 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-12-11 16:22
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
University Of Michigan, Internal Medicine - Infectious Disease
INSDC
Bioproject accession
PRJNA1079770
INSDC accession
PP903809.1
NCBI release date
2024-06-16
NCBI update date
2024-06-16
Alignment states and QC metrics
Completeness
81.03%
Length
14123
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
1
Total SNPs
160
Total unknown nucs
1786
Sample details
Collection country
USA
Collection date
2024-03-16
Isolate name
hRSV-A-G43S14T0
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Clade & Lineage
Lineage
A.D.1.5
Nucleotide mutations
Substitutions
T
928
C
G
1000
A
C
1012
T
T
1048
C
G
1050
A
T
1224
C
T
1359
C
G
1662
A
T
1668
C
T
1671
C
C
1788
T
T
1791
C
C
1806
T
T
1882
C
T
1980
C
T
2139
C
T
2165
C
G
2285
A
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Deletions
7555
Insertions
ins_2299:G
Amino acid mutations
Substitutions
F
F:
V
127
I
G
G:
I
134
K
G:
L
142
S
G:
G
224
V
G:
S
243
I
G:
K
262
E
G:
I
265
L
G:
D
284
G
G:
Y
304
H
G:
T
319
I
G:
T
320
A
L
L:
P
171
L
L:
T
179
S
L:
S
216
N
L:
R
256
K
L:
Y
598
H
L:
M
1225
I
L:
L
1438
Q
L:
V
1472
G
L:
I
1653
V
L:
K
1661
N
M
M:
M
43
I
N
N:
V
352
A
P
P:
L
55
P
Deletions
None
Insertions
None
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