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Influenza A/H5N1
RSV-A
RSV B
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GS_000XV50.1
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Display Name: GS_000XV50.1/2024-04-01
Bonificio,
B.; Schnurr,
V.; Russel,
A.; Griesemer,
S.; Lamson,
D. M.; St. George,
K.
Submission details
Submission ID
PP997255.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:22:19 UTC
Date released
2024-12-11 16:42:51 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-12-11 16:22
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
David Axelrod Institute, Virology
Alignment states and QC metrics
Completeness
18.19%
Length
2770
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
50
Total unknown nucs
0
Sample details
Collection country
USA
Collection date
2024-04-01
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PP997255.1
NCBI release date
2024-07-15
NCBI update date
2024-07-15
Clade & Lineage
Lineage
A.D.5.2
Nucleotide mutations
Substitutions
C
4673
T
C
4718
T
A
4720
G
C
4821
T
C
4842
T
C
4863
T
C
4919
T
C
4952
T
G
5020
A
T
5052
A
C
5203
T
C
5268
A
A
5277
G
G
5322
A
G
5345
A
C
5355
T
T
5368
C
C
5374
A
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Deletions
None
Insertions
None
Amino acid mutations
Substitutions
F
F:
A
103
T
F:
T
122
A
F:
S
362
L
F:
R
553
K
G
G:
R
8
C
G:
A
57
V
G:
S
64
L
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
I
134
K
G:
P
206
Q
G:
K
209
R
G:
G
224
E
G:
G
232
R
G:
T
235
I
G:
S
243
I
G:
L
248
I
G:
K
262
E
G:
I
265
L
G:
D
284
G
G:
V
303
A
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Deletions
None
Insertions
None
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