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GS_000YAT6.1
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Display Name: GS_000YAT6.1/2024-06-21
Franco,
D.; Goya,
S.; Martinez,
A.; Moreno,
B.; Valdespino,
E.; Gaitan,
M.; Gonzalez,
C.; Moreno,
A.; Capitan-Barrios,
Z.; Carrera,
J. P.; Lopez-Verges,
S.; Pascale,
J. M.; Das,
S. R.; Arbiza,
J.; Delfraro,
A.; Abrego,
L.
Submission details
Submission ID
PQ618048.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-11 16:22:19 UTC
Date released
2024-12-11 16:43:21 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-12-11 16:22
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
Gorgas Memorial Institute of Health Studies, Department of Research in Virology and Biotechnology
Alignment states and QC metrics
Completeness
99.91%
Length
15214
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
2
Total SNPs
230
Total unknown nucs
0
Sample details
Collection country
Panama
Collection date
2024-06-21
Isolate name
hRSV/A/Panama/ICGES-364/2024
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PQ618048.1
NCBI release date
2024-11-25
NCBI update date
2024-11-25
Clade & Lineage
Lineage
A.D.3.2
Nucleotide mutations
Substitutions
T
66
A
A
67
G
C
90
T
C
156
T
C
183
T
A
280
G
G
587
T
G
590
A
C
604
T
A
608
G
G
664
A
A
682
G
T
862
C
T
988
G
C
1012
T
G
1034
A
G
1050
A
G
1077
A
Show more
Deletions
None
Insertions
ins_2298:A, ins_3154:A
Amino acid mutations
Substitutions
F
F:
T
12
I
F:
S
276
N
G
G:
P
71
L
G:
H
90
Y
G:
L
97
F
G:
G
98
V
G:
L
101
S
G:
T
113
I
G:
V
131
D
G:
I
134
K
G:
N
178
G
G:
G
224
E
G:
P
230
T
G:
S
243
T
G:
H
258
Q
G:
K
262
E
G:
I
265
L
G:
H
266
L
G:
S
275
N
G:
D
284
G
G:
P
298
L
G:
Y
304
H
L
L:
P
171
L
L:
R
256
K
L:
Y
598
H
L:
L
835
M
L:
L
1438
Q
L:
G
1550
S
L:
I
1653
V
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
N
N:
V
352
A
NS1
NS1:
I
71
V
NS2
NS2:
T
4
A
P
P:
L
55
P
P:
S
60
P
P:
T
92
I
Deletions
None
Insertions
None
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