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GS_0010EKE.1

Display Name: Spain/GS_0010EKE.1/2025-04-04
C. Andres, A. Gonzalez Sanchez, I. Prats, K. Garcia Comunas, E. Dima, M. C. Martin, T. Pumarola & A. Anton

Submission details

Submission ID
OZ280137.1
Submitting group
Date submitted
2025-07-09 05:01:58 UTC
Date released
2025-07-09 05:21:09 UTC

Authors

Author affiliations
Hospital Universitari Vall d'Hebron, Barcelona, Barcelona

INSDC

Bioproject accession
Biosample accession
INSDC accession
NCBI release date
2025-07-01
NCBI update date
2025-07-01

Alignment states and QC metrics

Completeness
99.82%
Length
15199
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
3
Total SNPs
215
Total unknown nucs
0

Sample details

Collection country
Spain
Collection subdivision level 1
Catalonia
Collection date
2025-04-04
Isolate name
hRSV/A/Spain/CT-HUJO003493/2025

Clade & Lineage

Lineage
A.D.3

Nucleotide mutations

Mutations called relative to the NC_006432.1 reference

Substitutions

  • T59C
  • T66A
  • C75A
  • C90T
  • C183T
  • G192A
  • G587T
  • C589T
  • C983A
  • C1012T
  • G1034A
  • G1050A
  • G1077A
  • T1359C
  • A1361G
  • T1413A
  • T1422C
  • C1788T
    • Deletions
    4592
    Insertions
    ins_15115:TT, ins_3154:A

    Amino acid mutations

    Mutations called relative to the NC_006432.1 reference

    Substitutions

    F

  • F:T12I
  • F:A23T
  • F:K123R

    • G

  • G:A57T
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N178G
  • G:G224E
  • G:S243I
  • G:T245A
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L
  • G:D284G
  • G:P298L

    • L

  • L:N37D
  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:S1593G
  • L:N1723S
  • L:G1731D
  • L:K2064R
  • L:T2069A

    • N

  • N:K84R
  • N:V352A

    • P

  • P:L55P
  • P:T92M

    • SH

  • SH:A60T
    • Deletions
    None
    Insertions
    None