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RSV-A
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Organisms
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
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GS_001TJ5J.1
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Display Name: Australia/GS_001TJ5J.1/2025-05-07
X. Dong,
S. Edwards,
Y. M. Deng,
I. Barr,
A. Hirankitti &
C. Dapat
Submission details
Submission ID
OZ331950.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-10-15 05:02:59 UTC
Date released
2025-10-15 05:20:11 UTC
Authors
Author affiliations
WHO Collaborating Centre for Reference and Research on Influenza, Melbourne, Victoria
INSDC
Bioproject accession
PRJEB98192
Biosample accession
SAMEA120260368
INSDC accession
OZ331950.1
NCBI release date
2025-09-26
NCBI update date
2025-09-26
Alignment states and QC metrics
Completeness
99.93%
Length
15216
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
4
Total SNPs
235
Total unknown nucs
0
Sample details
Collection country
Australia
Collection subdivision level 1
Northern Territory; Darwin
Collection date
2025-05-07
Isolate name
hRSV/A/Australia/NT-RDH0189/2025
Clade & Lineage
Lineage
A.D.1.6
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
T
66
A
C
90
T
C
183
T
G
198
A
A
303
T
C
360
T
A
399
G
T
497
C
G
551
A
G
555
A
G
602
A
G
664
A
T
697
C
G
747
A
G
1000
A
C
1012
T
T
1035
A
C
1046
T
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Deletions
4175, 4592
Insertions
ins_0:TTGC
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
F
F:
V
76
I
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
G
106
E
G:
T
119
A
G:
P
120
L
G:
S
121
I
G:
I
134
K
G:
L
142
S
G:
P
143
S
G:
P
217
S
G:
G
224
E
G:
N
242
T
G:
S
243
I
G:
K
262
E
G:
I
265
L
G:
T
281
A
G:
D
284
G
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L
L:
N
143
D
L:
P
171
L
L:
T
179
S
L:
R
256
K
L:
Y
598
H
L:
M
1225
I
L:
L
1438
Q
L:
S
1597
N
L:
I
1653
V
L:
K
1661
N
L:
H
1690
Y
L:
H
1707
Q
L:
N
1719
Y
L:
N
1723
S
L:
N
1724
D
L:
E
1725
G
L:
G
1731
D
L:
H
1804
Y
L:
Y
2163
N
M
M:
M
43
I
M:
V
153
A
N
N:
V
352
A
NS2
NS2:
D
2
N
NS2:
R
50
K
P
P:
L
55
P
SH
SH:
I
38
S
Deletions
None
Insertions
None
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