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GS_0026XJL.1

Display Name: Spain/GS_0026XJL.1/2022-11-27
S. Rojo-Alba, Z. Perez-Martinez, J. Boga, M. E. Alvarez-Arguelles, J. M. Gonzalez-Alba & S. Melon

Submission details

Submission ID
OR493382.1
Submitting group
Date submitted
2025-07-09 05:04:33 UTC
Date released
2025-07-09 05:12:51 UTC

Authors

Author affiliations
Hospital central de Asturias, Microbiologia

Alignment states and QC metrics

Completeness
2.54%
Length
387
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
12
Total unknown nucs
0

Sample details

Collection country
Spain
Collection date
2022-11-27
Isolate name
252295743HUCA

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2023-10-04
NCBI update date
2023-10-04

Clade & Lineage

Lineage
B.D.E.1

Nucleotide mutations

Substitutions

  • A5198G
  • C5285T
  • C5307T
  • C5377T
  • T5400C
  • A5413C
  • T5448C
  • T5455C
  • T5468C
  • C5476T
  • T5498C
  • C5530T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Substitutions

    G

  • G:K185E
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H
    • Deletions
    None
    Insertions
    None