Warning: Development or Keycloak main database is enabled. Development environment only.

GS_002HAS2.1

Display Name: USA/GS_002HAS2.1/2025-02-25
Gruner, W. E.; Muehleman, D. M.; Fries, A. C.; Hanson, J. F.; Kramer, D. L.; Demarcus, L. S.; Wasik, P. M.; Robbins, A. S.; Macias, E. A.; Garcia, J. M.; Renkas, M. C.; Hartless, T. R.; Hardy, J.

Submission details

Submission ID
PV359533.1.seg1/PV359534.1.seg2/PV359532.1.seg3/PV359527.1.seg4/PV359530.1.seg5/PV359529.1.seg6/PV359528.1.seg7/PV359531.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-04-03 07:43:46 UTC
Date released
2025-04-03 07:45:56 UTC

Authors

Author affiliations
United States Air Force School of Aerospace Medicine Public Health Submission Group, 711th Human Performance Wing

Sample details

Collection country
USA
Collection subdivision level 1
Florida
Collection date
2025-02-25
Isolate name
USAFSAM-15686

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
PV359533.1
INSDC accession seg2
PV359534.1
INSDC accession seg3
PV359532.1
INSDC accession seg4
PV359527.1
INSDC accession seg5
PV359530.1
INSDC accession seg6
PV359529.1
INSDC accession seg7
PV359528.1
INSDC accession seg8
PV359531.1
NCBI release date
2025-03-21

Alignment states and QC metrics seg1

Length seg1
2259

Alignment states and QC metrics seg2

Length seg2
2313

Alignment states and QC metrics seg3

Length seg3
2181

Alignment states and QC metrics seg4

Length seg4
1749

Alignment states and QC metrics seg5

Length seg5
1683

Alignment states and QC metrics seg6

Length seg6
1408

Alignment states and QC metrics seg7

Length seg7
1076

Alignment states and QC metrics seg8

Length seg8
1027

INSDC seg4

Lineage seg4
vic

Clade

Lineage
vic

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None