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Influenza A
Influenza A/H3N2
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Influenza A
RSV-A
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GS_007CSGD.1
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Display Name: USA/GS_007CSGD.1/2015-10-12
Jernigan,
D.; Wentworth,
D.; Katz,
J.; Barnes,
J.; Garten,
R.; Xu,
X.
Submission details
Submission ID
KX949391.1.seg1/KX949392.1.seg2/KX949393.1.seg3/KX949394.1.seg4/KX949395.1.seg5/KX949396.1.seg6/KX949397.1.seg7/KX949398.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-01-15 06:27:28 UTC
Date released
2025-01-15 06:49:48 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2025-01-15 06:29
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
Centers for Disease Control and Prevention, WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division
Sample details
Collection country
USA
Collection date
2015-10-12
Isolate name
EPI_ISL_208217
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession seg1
KX949391.1
INSDC accession seg2
KX949392.1
INSDC accession seg3
KX949393.1
INSDC accession seg4
KX949394.1
INSDC accession seg5
KX949395.1
INSDC accession seg6
KX949396.1
INSDC accession seg7
KX949397.1
INSDC accession seg8
KX949398.1
NCBI release date
2016-10-19
Alignment states and QC metrics seg1
Length seg1
2316
Alignment states and QC metrics seg2
Length seg2
2316
Alignment states and QC metrics seg3
Length seg3
2208
Alignment states and QC metrics seg4
Length seg4
1752
Alignment states and QC metrics seg5
Length seg5
1540
Alignment states and QC metrics seg6
Length seg6
1433
Alignment states and QC metrics seg7
Length seg7
1002
Alignment states and QC metrics seg8
Length seg8
865
INSDC seg4
Subtype seg4
H1
INSDC seg6
Subtype seg6
N1
Clade
HA subtype
H1
NA subtype
N1
Nucleotide mutations
Substitutions
Deletions
None
Insertions
None
Amino acid mutations
Substitutions
Deletions
None
Insertions
None
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