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GS_007CSL4.1

Display Name: USA/GS_007CSL4.1/2017-10-03
Jernigan, D.; Wentworth, D.; Katz, J.; Barnes, J.; Garten, R.; Xu, X.

Submission details

Submission ID
CY257738.1.seg1/CY257739.1.seg2/CY257740.1.seg3/CY257741.1.seg4/CY257742.1.seg5/CY257743.1.seg6/CY257744.1.seg7/CY257745.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-01-15 06:27:28 UTC
Date released
2025-01-15 06:49:48 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-01-15 06:29insdc_ingest_userOPEN

Authors

Author affiliations
Centers for Disease Control and Prevention, WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division

Sample details

Collection country
USA
Collection subdivision level 1
Nevada
Collection date
2017-10-03
Isolate name
EPI_ISL_285715

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
CY257738.1
INSDC accession seg2
CY257739.1
INSDC accession seg3
CY257740.1
INSDC accession seg4
CY257741.1
INSDC accession seg5
CY257742.1
INSDC accession seg6
CY257743.1
INSDC accession seg7
CY257744.1
INSDC accession seg8
CY257745.1
NCBI release date
2017-12-05

Alignment states and QC metrics seg1

Length seg1
2316

Alignment states and QC metrics seg2

Length seg2
2316

Alignment states and QC metrics seg3

Length seg3
2209

Alignment states and QC metrics seg4

Length seg4
1737

Alignment states and QC metrics seg5

Length seg5
1542

Alignment states and QC metrics seg6

Length seg6
1441

Alignment states and QC metrics seg7

Length seg7
1002

Alignment states and QC metrics seg8

Length seg8
865

INSDC seg4

Subtype seg4
H3

INSDC seg6

Subtype seg6
N2

Clade

HA subtype
H3
NA subtype
N2

Nucleotide mutations

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Substitutions
Deletions
None
Insertions
None