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GS_00DHBYC.1

Display Name: USA/GS_00DHBYC.1/2025-03-07
Kepler, L.; Killian, M.; Hicks, J.; Norris, C.; Stuber, T.

Submission details

Submission ID
PV419712.1.seg1/PV419713.1.seg2/PV419714.1.seg3/PV419715.1.seg4/PV419716.1.seg5/PV419717.1.seg6/PV419718.1.seg7/PV419719.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-04-03 08:58:35 UTC
Date released
2025-04-03 09:05:20 UTC

Authors

Author affiliations
National Veterinary Services Laboratories, Diagnostic Virology Laboratory

Sample details

Collection country
USA
Collection subdivision level 1
Arizona
Collection date
2025-03-07
Isolate name
25-009234-001

Host

Host name scientific
Felis catus
Host taxon id
9685

INSDC

INSDC accession seg1
PV419712.1
INSDC accession seg2
PV419713.1
INSDC accession seg3
PV419714.1
INSDC accession seg4
PV419715.1
INSDC accession seg5
PV419716.1
INSDC accession seg6
PV419717.1
INSDC accession seg7
PV419718.1
INSDC accession seg8
PV419719.1
NCBI release date
2025-03-31

Alignment states and QC metrics seg1

Length seg1
2280

Alignment states and QC metrics seg2

Length seg2
2274

Alignment states and QC metrics seg3

Length seg3
2151

Alignment states and QC metrics seg4

Length seg4
1701

Alignment states and QC metrics seg5

Length seg5
1497

Alignment states and QC metrics seg6

Length seg6
1410

Alignment states and QC metrics seg7

Length seg7
982

Alignment states and QC metrics seg8

Length seg8
838

INSDC seg4

Subtype seg4
H1

INSDC seg6

Subtype seg6
N1

Clade

HA subtype
H1
NA subtype
N1

Nucleotide mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None