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GS_00DU9YS.1

Display Name: USA/GS_00DU9YS.1/2025-04-01
Rothstein, A. P.; Collins, S.; Muir, G.; Simas, A.; Lu, B.; Cosca, B.; Girinathan, B.; Leeson, P.; Philipson, C. W.; Plocik, A. M.; Simen, B.

Submission details

Submission ID
PV550525.1.seg1/PV550524.1.seg2/PV550519.1.seg4/PV550522.1.seg5/PV550521.1.seg6/PV550520.1.seg7/PV550523.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-05-20 10:47:13 UTC
Date released
2025-05-20 11:08:50 UTC

Authors

Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity

Sample details

Collection country
USA
Collection subdivision level 1
Florida
Collection date
2025-04-01
Isolate name
GKISBBBE25664

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
PV550525.1
INSDC accession seg2
PV550524.1
INSDC accession seg4
PV550519.1
INSDC accession seg5
PV550522.1
INSDC accession seg6
PV550521.1
INSDC accession seg7
PV550520.1
INSDC accession seg8
PV550523.1
NCBI release date
2025-04-22

Alignment states and QC metrics seg1

Length seg1
2318

Alignment states and QC metrics seg2

Length seg2
2316

Alignment states and QC metrics seg4

Length seg4
1736

Alignment states and QC metrics seg5

Length seg5
1540

Alignment states and QC metrics seg6

Length seg6
1432

Alignment states and QC metrics seg7

Length seg7
1002

Alignment states and QC metrics seg8

Length seg8
874

INSDC seg4

Subtype seg4
H1

INSDC seg6

Subtype seg6
N1

Clade

HA subtype
H1
NA subtype
N1

Nucleotide mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None