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GS_00DUA1L.1

Display Name: USA/GS_00DUA1L.1/2025-03-27
Rothstein, A. P.; Collins, S.; Muir, G.; Simas, A.; Lu, B.; Cosca, B.; Girinathan, B.; Leeson, P.; Philipson, C. W.; Plocik, A. M.; Simen, B.

Submission details

Submission ID
PV550539.1.seg4/PV550540.1.seg7/PV550541.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-05-20 10:47:13 UTC
Date released
2025-05-20 11:08:50 UTC

Authors

Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity

Sample details

Collection country
USA
Collection subdivision level 1
Florida
Collection date
2025-03-27
Isolate name
GKISBBBE37840

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg4
PV550539.1
INSDC accession seg7
PV550540.1
INSDC accession seg8
PV550541.1
NCBI release date
2025-04-22

Alignment states and QC metrics seg4

Length seg4
1752

Alignment states and QC metrics seg7

Length seg7
1002

Alignment states and QC metrics seg8

Length seg8
877

INSDC seg4

Subtype seg4
H1

Clade

HA subtype
H1

Nucleotide mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None