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GS_00DUA86.1

Display Name: USA/GS_00DUA86.1/2025-04-07
Rothstein, A. P.; Collins, S.; Muir, G.; Simas, A.; Lu, B.; Cosca, B.; Girinathan, B.; Leeson, P.; Philipson, C. W.; Plocik, A. M.; Simen, B.

Submission details

Submission ID
PV550588.1.seg2/PV550587.1.seg3/PV550582.1.seg4/PV550585.1.seg5/PV550584.1.seg6/PV550583.1.seg7/PV550586.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-05-20 10:47:13 UTC
Date released
2025-05-20 11:08:50 UTC

Authors

Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity

Sample details

Collection country
USA
Collection subdivision level 1
New Jersey
Collection date
2025-04-07
Isolate name
GKISBBBE95763

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg2
PV550588.1
INSDC accession seg3
PV550587.1
INSDC accession seg4
PV550582.1
INSDC accession seg5
PV550585.1
INSDC accession seg6
PV550584.1
INSDC accession seg7
PV550583.1
INSDC accession seg8
PV550586.1
NCBI release date
2025-04-22

Alignment states and QC metrics seg2

Length seg2
2316

Alignment states and QC metrics seg3

Length seg3
2204

Alignment states and QC metrics seg4

Length seg4
1737

Alignment states and QC metrics seg5

Length seg5
1541

Alignment states and QC metrics seg6

Length seg6
1443

Alignment states and QC metrics seg7

Length seg7
1004

Alignment states and QC metrics seg8

Length seg8
880

INSDC seg4

Subtype seg4
H3

INSDC seg6

Subtype seg6
N2

Clade

HA subtype
H3
NA subtype
N2

Nucleotide mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None