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GS_00DWMZ8.1
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Display Name: USA/GS_00DWMZ8.1/2025-03-30
Kunerth,
H. D.; Plumb,
M.; Namugenyi,
S.; Evans,
D.; Bohnkers-Voels,
L.; Strain,
A.
Submission details
Submission ID
PV629290.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-05-28 12:38:05 UTC
Date released
2025-05-28 12:38:20 UTC
Authors
Author affiliations
Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab
INSDC
Bioproject accession
PRJNA1048457
Biosample accession
SAMN48396728
INSDC accession
PV629290.1
NCBI release date
2025-05-21
NCBI update date
2025-05-21
SRA run accession
SRR33474416
Alignment states and QC metrics
Completeness
96.56%
Length
14898
Total ambiguous nucs
3
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
0
Total SNPs
139
Total unknown nucs
198
Sample details
Collection country
USA
Collection subdivision level 1
Minnesota
Collection date
2025-03-30
Isolate name
MN-MDH-RSVB-03030
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Clade & Lineage
Lineage
B.D.E.1
Nucleotide mutations
Substitutions
T
483
G
G
513
T
G
579
A
C
598
T
C
998
A
G
1138
A
T
1177
C
G
1385
A
T
1723
C
G
1732
A
T
1846
C
C
2074
T
C
2198
T
T
2257
A
C
2554
T
A
2628
G
C
2691
T
C
2821
T
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Deletions
973, 4586
Insertions
None
Amino acid mutations
Substitutions
F
F:
A
102
V
F:
S
190
N
F:
S
211
N
F:
S
389
P
G
G:
A
74
V
G:
S
100
G
G:
P
214
S
G:
P
221
L
G:
D
251
N
G:
I
252
T
G:
K
256
N
G:
I
268
T
G:
S
275
P
G:
L
284
I
G:
Y
285
H
G:
*
311
Q
L
L:
N
149
H
L:
S
162
T
L:
Y
177
N
L:
K
570
R
L:
R
1759
K
L:
T
1987
I
L:
I
2016
M
N
N:
V
97
I
N:
D
387
E
Deletions
None
Insertions
None
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