Warning: Development or Keycloak main database is enabled. Development environment only.
X
GenSpectrum
Organisms
Influenza A
GenSpectrum
Organisms
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
Docs
API docs
Influenza A
|
Browse data
Select organism section
Browse data
GS_00DWRDB.1
Download
Download FASTA
Download metadata TSV
Display Name: USA/GS_00DWRDB.1/2024-02-07
A. Simas,
A. Rothstein,
A. Sum,
G. Muir &
X. Qiu
Submission details
Submission ID
PQ070662.1.seg3/PQ070761.1.seg4/PQ070182.1.seg5/PQ070463.1.seg6/PQ070863.1.seg7
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-12-11 15:52:10 UTC
Date released
2025-12-11 16:07:16 UTC
Authors
Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity
Sample details
Collection country
USA
Collection subdivision level 1
Virginia
Collection date
2024-02-07
Isolate name
H20-354-5080
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession seg3
PQ070662.1
INSDC accession seg4
PQ070761.1
INSDC accession seg5
PQ070182.1
INSDC accession seg6
PQ070463.1
INSDC accession seg7
PQ070863.1
NCBI release date
2024-07-30
Alignment states and QC metrics seg3
Length seg3
1876
Alignment states and QC metrics seg4
Length seg4
1634
Alignment states and QC metrics seg5
Length seg5
1414
Alignment states and QC metrics seg6
Length seg6
1277
Alignment states and QC metrics seg7
Length seg7
972
INSDC seg4
Subtype seg4
H1
INSDC seg6
Subtype seg6
N1
Clade
HA subtype
H1
NA subtype
N1
Nucleotide mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Load sequences