Warning: Development or Keycloak main database is enabled. Development environment only.
X
GenSpectrum
Organisms
Influenza A
GenSpectrum
Organisms
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
Docs
API docs
Influenza A
|
Browse data
GS_00F0GCD.1
Download
Download FASTA
Download metadata TSV
Display Name: Slovakia/GS_00F0GCD.1/2025-11-12
T. Sladecek
Submission details
Submission ID
OZ374402.1.seg1/OZ374401.1.seg2/OZ374397.1.seg3/OZ374395.1.seg4/OZ374399.1.seg5/OZ374396.1.seg6/OZ374398.1.seg7/OZ374400.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-12-06 04:06:28 UTC
Date released
2025-12-06 04:07:03 UTC
Authors
Author affiliations
Science Park of Comenius University of Bratislava, Ilkovicova 8, 841 04 Bratislava
INSDC
Bioproject accession
PRJEB72255
Biosample accession
SAMEA120781553
INSDC accession seg1
OZ374402.1
INSDC accession seg2
OZ374401.1
INSDC accession seg3
OZ374397.1
INSDC accession seg4
OZ374395.1
INSDC accession seg5
OZ374399.1
INSDC accession seg6
OZ374396.1
INSDC accession seg7
OZ374398.1
INSDC accession seg8
OZ374400.1
NCBI release date
2025-12-04
SRA run accession
ERR15991011
Sample details
Collection country
Slovakia
Collection date
2025-11-12
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Alignment states and QC metrics seg1
Length seg1
2308
Alignment states and QC metrics seg2
Length seg2
2312
Alignment states and QC metrics seg3
Length seg3
2201
Alignment states and QC metrics seg4
Length seg4
1745
Alignment states and QC metrics seg5
Length seg5
1540
Alignment states and QC metrics seg6
Length seg6
1426
Alignment states and QC metrics seg7
Length seg7
998
Alignment states and QC metrics seg8
Length seg8
863
INSDC seg4
Subtype seg4
H1
INSDC seg6
Subtype seg6
N1
Clade
HA subtype
H1
NA subtype
N1
Nucleotide mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Load sequences