Warning: Development or Keycloak main database is enabled. Development environment only.
X
GenSpectrum
RSV B
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
RSV-A
RSV B
Browse
GenSpectrum
Browse
Docs
API docs
GS_00FEMUF.1
Download
Download FASTA
Download metadata TSV
Display Name: Spain/GS_00FEMUF.1/2025-04-24
C. Andres,
A. Gonzalez Sanchez,
I. Prats,
K. Garcia Comunas,
E. Dima,
M. C. Martin,
T. Pumarola &
A. Anton
Submission details
Submission ID
OZ279958.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-07-08 20:23:43 UTC
Date released
2025-07-08 20:25:32 UTC
Authors
Author affiliations
Hospital Universitari Vall d'Hebron, Barcelona, Barcelona
INSDC
Bioproject accession
PRJEB91358
Biosample accession
SAMEA118626443
INSDC accession
OZ279958.1
NCBI release date
2025-07-01
NCBI update date
2025-07-01
Alignment states and QC metrics
Completeness
99.36%
Length
15201
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
3
Total SNPs
146
Total unknown nucs
76
Sample details
Collection country
Spain
Collection subdivision level 1
Catalonia
Collection date
2025-04-24
Isolate name
hRSV/B/Spain/CT-HUAV323638/2025
Clade & Lineage
Lineage
B.D.E.1
Nucleotide mutations
Substitutions
T
29
C
A
134
G
G
513
T
G
579
A
C
688
T
C
998
A
G
1385
A
G
1732
A
G
1801
A
T
1846
C
T
1918
C
C
2074
T
C
2198
T
C
2287
T
C
2554
T
T
2605
C
C
2691
T
T
2962
G
Show more
Deletions
973, 4586
Insertions
ins_15088:TAT
Amino acid mutations
Substitutions
F
F:
R
42
K
F:
Y
114
C
F:
S
190
N
F:
S
211
N
F:
S
389
P
G
G:
K
32
R
G:
A
74
V
G:
S
100
G
G:
T
131
A
G:
I
137
T
G:
T
139
I
G:
P
214
S
G:
P
221
L
G:
K
223
E
G:
I
252
T
G:
K
256
N
G:
S
265
P
G:
I
268
T
G:
S
275
P
G:
Y
285
H
G:
*
311
Q
L
L:
N
176
D
L:
K
570
R
L:
F
573
Y
L:
T
1314
A
L:
S
1320
P
L:
R
1759
K
L:
V
1965
I
L:
T
1987
I
N
N:
V
97
I
P
P:
S
220
A
Deletions
None
Insertions
None
Load sequences