Warning: Development or Keycloak main database is enabled. Development environment only.

GS_00FES1X.1

Display Name: Spain/GS_00FES1X.1/2025-05-15
C. Andres, A. Gonzalez Sanchez, I. Prats, K. Garcia Comunas, E. Dima, M. C. Martin, T. Pumarola & A. Anton

Submission details

Submission ID
OZ280308.1
Submitting group
Date submitted
2025-07-08 20:23:43 UTC
Date released
2025-07-08 20:25:32 UTC

Authors

Author affiliations
Hospital Universitari Vall d'Hebron, Barcelona, Barcelona

INSDC

Bioproject accession
Biosample accession
INSDC accession
NCBI release date
2025-07-01
NCBI update date
2025-07-01

Alignment states and QC metrics

Completeness
98.11%
Length
15201
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
2
Total SNPs
143
Total unknown nucs
265

Sample details

Collection country
Spain
Collection subdivision level 1
Catalonia
Collection date
2025-05-15
Isolate name
hRSV/B/Spain/CT-HUJO873120/2025

Clade & Lineage

Lineage
B.D.E.1.1

Nucleotide mutations

Substitutions

  • A276G
  • G332A
  • G513T
  • G579A
  • C628T
  • C998A
  • A1132G
  • C1198T
  • T1333C
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • A2550G
  • C2554T
  • T2595G
  • C2691T
    • Deletions
    973
    Insertions
    ins_15092:AT

    Amino acid mutations

    Substitutions

    F

  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H

    • L

  • L:K570R
  • L:N590S
  • L:R1759K
  • L:T1987I

    • N

  • N:V97I

    • NS1

  • NS1:K74E

    • P

  • P:D225N

    • SH

  • SH:I49M
    • Deletions
    None
    Insertions
    None