Warning: Development or Keycloak main database is enabled. Development environment only.
X
GenSpectrum
Influenza A
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
RSV-A
RSV B
Browse
GenSpectrum
Browse
Docs
API docs
GS_00FQ3RJ.1
Download
Download FASTA
Download metadata TSV
Display Name: USA/GS_00FQ3RJ.1/2025-07-25
W. H. Clore &
P. C. Gauger
Submission details
Submission ID
PX148145.1.seg6
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-08-20 02:03:31 UTC
Date released
2025-08-20 02:04:00 UTC
Authors
Author affiliations
Iowa State University Veterinary Diagnostic Lab, Bioinformatics
Sample details
Collection country
USA
Collection subdivision level 1
Iowa
Collection date
2025-07-25
Isolate name
A/swine/Iowa/078808_(A02858737)_N2/2025
Host
Host name scientific
Sus scrofa
Host taxon id
9823
INSDC
INSDC accession seg6
PX148145.1
NCBI release date
2025-08-19
Alignment states and QC metrics seg6
Length seg6
1410
INSDC seg6
Subtype seg6
N2
Clade
NA subtype
N2
Nucleotide mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Load sequences