Warning: Development or Keycloak main database is enabled. Development environment only.
X
GenSpectrum
Influenza B
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
RSV-A
RSV B
Browse
GenSpectrum
Browse
Docs
API docs
GS_00FQ5E5.1
Download
Download FASTA
Download metadata TSV
Display Name: Japan/GS_00FQ5E5.1/2025-07-05
W. E. Gruner,
V. S. Hogan,
D. M. Muehleman,
A. C. Fries,
J. F. Hanson,
D. L. Kramer,
L. S. Demarcus,
P. M. Wasik,
A. S. Robbins,
E. A. Macias,
J. M. Garcia,
M. C. Renkas &
T. R. Hartless
Submission details
Submission ID
PX207900.1.seg1/PX207901.1.seg2/PX207899.1.seg3/PX207894.1.seg4/PX207897.1.seg5/PX207896.1.seg6/PX207895.1.seg7/PX207898.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-08-21 19:38:14 UTC
Date released
2025-08-21 19:38:20 UTC
Authors
Author affiliations
United States Air Force School of Aerospace Medicine Public Health Submission Group, 711th Human Performance Wing
Sample details
Collection country
Japan
Collection subdivision level 1
Aomori
Collection date
2025-07-05
Isolate name
B/Aomori/USAFSAM-16239/2025
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession seg1
PX207900.1
INSDC accession seg2
PX207901.1
INSDC accession seg3
PX207899.1
INSDC accession seg4
PX207894.1
INSDC accession seg5
PX207897.1
INSDC accession seg6
PX207896.1
INSDC accession seg7
PX207895.1
INSDC accession seg8
PX207898.1
NCBI release date
2025-08-21
Alignment states and QC metrics seg1
Length seg1
2259
Alignment states and QC metrics seg2
Length seg2
2313
Alignment states and QC metrics seg3
Length seg3
2181
Alignment states and QC metrics seg4
Length seg4
1749
Alignment states and QC metrics seg5
Length seg5
1683
Alignment states and QC metrics seg6
Length seg6
1408
Alignment states and QC metrics seg7
Length seg7
1076
Alignment states and QC metrics seg8
Length seg8
1027
INSDC seg4
Lineage seg4
vic
Clade
Lineage
vic
Nucleotide mutations
Mutations called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
Deletions
None
Insertions
None
Load sequences